{ "_id": "6a33b7a43efcd9bda43aefb5", "Package": "ondisc", "Title": "Algorithms and Data Structures for Large Single-Cell Expression\nMatrices", "Version": "1.3.5", "Authors@R": "c(person(given = \"Timothy\",\nfamily = \"Barry\",\nrole = c(\"aut\", \"cre\"),\nemail = \"tbarry@hsph.harvard.edu\",\ncomment=c(ORCID=\"0000-0002-4356-627X\")),\nperson(given = \"Songcheng\",\nfamily = \"Dai\",\nrole = \"ctb\"),\nperson(given = \"Yixuan\",\nfamily = \"Qiu\",\nrole = \"ctb\"),\nperson(given = \"Eugene\",\nfamily = \"Katsevich\",\nrole = c(\"aut\", \"ths\"),\nemail = \"ekatsevi@wharton.upenn.edu\"))", "Description": "Single-cell datasets are growing in size, posing\nchallenges as well as opportunities for genomics researchers.\n'ondisc' is an R package that facilitates analysis of\nlarge-scale single-cell data out-of-core on a laptop or\ndistributed across tens to hundreds of processors on a cluster\nor cloud. In both of these settings, 'ondisc' requires only a\nfew gigabytes of memory, even if the input data are tens of\ngigabytes in size. 'ondisc' mainly is oriented toward\nsingle-cell CRISPR screen analysis, but also can be used for\nsingle-cell differential expression and single-cell\nco-expression analyses. 'ondisc' is powered by several new,\nefficient algorithms for manipulating and querying large,\nsparse expression matrices.", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "biocViews": "DataImport, SingleCell, DifferentialExpression, CRISPR", "RoxygenNote": "7.3.2", "SystemRequirements": "GNU make", "Config/testthat/edition": "3", "URL": "https://timothy-barry.github.io/ondisc/,\nhttps://timothy-barry.github.io/sceptre-book/", "BugReports": "https://github.com/timothy-barry/ondisc/issues", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "make libx11-dev", "Repository": "https://timothy-barry.r-universe.dev", "Date/Publication": "2026-06-09 16:57:02 UTC", "RemoteUrl": "https://github.com/timothy-barry/ondisc", "RemoteRef": "HEAD", "RemoteSha": "6f79c8492d85269528e6d0667780df2c0017c0ad", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-06-18 09:08:23 UTC", "User": "root" }, "Author": "Timothy Barry [aut, cre] (ORCID:\n),\nSongcheng Dai [ctb],\nYixuan Qiu [ctb],\nEugene Katsevich [aut, ths]", "Maintainer": "Timothy Barry ", "MD5sum": "5ceb331bd2eb6703856bd259ad572c94", "_user": "timothy-barry", "_type": "src", "_file": "ondisc_1.3.5.tar.gz", "_fileid": "74d694e4ef0070bb1387b38075f539d3430976fc5f46f73b963f76292afd1047", "_filesize": 367292, "_sha256": "74d694e4ef0070bb1387b38075f539d3430976fc5f46f73b963f76292afd1047", "_created": "2026-06-18T09:08:23.000Z", "_published": "2026-06-18T09:17:24.790Z", "_distro": "noble", "_jobs": [ { "job": 82094466078, "time": 146, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "7719022330" }, { "job": 82094466037, "time": 152, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7719023075" }, { "job": 82094466102, "time": 141, "config": "linux-release-arm64", "r": "4.6.0", "check": "ERROR", "artifact": "7719020384" }, { "job": 82094466099, "time": 155, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7719024004" }, { "job": 82094466122, "time": 210, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7719032923" }, { "job": 82094466031, "time": 489, "config": "macos-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "7719138204" }, { "job": 82094466059, "time": 179, "config": "macos-release-arm64", "r": "4.6.0", "check": "ERROR", "artifact": "7719032779" }, { "job": 82094466029, "time": 250, "config": "macos-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7719048368" }, { "job": 82093804828, "time": 215, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7718965597" }, { "job": 82094466128, "time": 129, "config": "wasm-release", "r": "4.6.0", "check": "FAIL", "artifact": "" }, { "job": 82094466061, "time": 176, "config": "windows-devel", "r": "4.7.0", "check": "ERROR", "artifact": "7719031528" }, { "job": 82094466040, "time": 203, "config": "windows-oldrel", "r": "4.5.3", "check": "ERROR", "artifact": "7719041053" }, { "job": 82094466096, "time": 192, "config": "windows-release", "r": "4.6.0", "check": "ERROR", "artifact": "7719037205" } ], "_buildurl": "https://github.com/r-universe/timothy-barry/actions/runs/27748799194", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/timothy-barry/ondisc", "_commit": { "id": "6f79c8492d85269528e6d0667780df2c0017c0ad", "author": "Tim Barry ", "committer": "Tim Barry ", "message": "fix compiler warning when reading an empty row\n", "time": 1781024222 }, "_maintainer": { "name": "Timothy Barry", "email": "tbarry@hsph.harvard.edu", "login": "timothy-barry", "description": "postdoc @ Boston Children's Hospital. 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